Synteny Analysis

A synteny analysis module can be used to quickly explore the evolution and diversification of large syntenic gene blocks, which is practical for gene gain-or-loss analysis.

Input file format

The input file is the gene ID of litchi, longan, rambutan, yellowhorn, Acer and soapberry. The specific gene ID format is as follows:

​x
Litchi: LITCHI002021
Longan: Dil.09g019490
Rambutan: Nl01g14020
Yellowhorn: EVM0009016
Acer: Acyan11G0132000
Soapberry: whz_017298-RA

Output file format

The analysis results show the collinearity of the input genes across various Solanaceae species, and a table of collinear genes is provided below, including coordinates and functional annotations.